This is more about education and changing a default.
The only issue here is not realizing the email field in the git config doesn't need to be your personal one or even real. And I agree more people should know this, but this is not something github or git needs to fix in any way.
Anyway, if you tick the keep my address private box on https://github.com/settings/emails, the email field on your profile won't show.
I don't think this is a big issue.