You seem to be under the mistaken impression, that burdened under 100's (literally) of rules, the govt can do a one off special project like this for $3,000. Seriously, I've fought the goverment too, and won, on some stupid requirements that were explicitly revoked at higher levels of govt but hadn't filtered down.
That one issue (went through chain to their legal team, and back a few times) cost more than $3,000 of the governments time.
You are constantly making the claim that the government is charging 50x what it should cost. You are wrong. Period. I've paid a relative fortune to have the government run a select query on a database. And they still messed it up, I could probably have run it in 30 seconds.
If scanning records is something you do, then I would STRONGLY suggest rather than trying to get the government to figure out how to scan records, you, without calling the rules silly, develop some experience scanning the records yourself. If you offer to scan, with experience, insurance, good equipment etc and make the stuff available for free - you will be welcomed in many places.
Now you are suing because they gave you the records free that someone else either paid the govt to prepare (unlikely - that would have been a SLOW process) or prepared themselves and gave a copy to the government (which was probably not required)? I find that pathetic. NY did a good thing by having the first requestor make available a copy for others.