I assume this is to prevent this phenomenon. If your comment is significantly worse than the rest of an active thread, it shouldn't be prominently displayed.
I noted more in my later comment responding to your (in my opinion) naive cheapshot on reddit, but the "best" algorithm, that is the default, does not simply rank by the number of votes. And even then, the nature of subreddits and people opting to subscribe to that which they're interested in goes a long way to putting their "upvotes" or "downvotes" into the context of the users in that subreddit.
People then upvote it even though it isn't related because it might be insightful.
I'm not a new user and my comments generally fair well here.
I (was, but am not now) downvoted on HN for saying that my posts on reddit get well received attention even with lots of noise... Seems ironic...