There is a real difference. Take the example of the “money pit” house, where the cost of repairs vastly outweighs the gain you get at the end (either in resale or in livability), vs a fixer upper house.
After is working on repairs, and after significant investment time and money, you are not as far along as you thought you would be. You update your calculations on time and cost based on your progress so far and any new problems you have uncovered.
A persistent person looks at the costs of a fixer upper, sees it is still likely worth doing, and is willing to put in the additional effort they had not originally planned for to see the project through. But they can also look at the future costs, recognize that the house is likely a money pit and continued work would be unlikely to ever yield a return on their investment, and that the time and money they have already spent are gone no matter what, but that they can prevent additional loss.
Someone biased by the sunk cost fallacy sees both projects the same. They look at the money pit and see that it is unlikely to show a return, but they hold on to the time and money they have already spent being lost if they walk away from the project, influencing them to continue.
To look at it another way, a persistent person would make the same calculation of the likely success of a project regardless if they came into it at the first point or the second point. They are persistent, so they won’t give up on something because it is more difficult than they originally thought and they won’t give up on worthwhile work just because it is hard. Someone biased by the sunk cost fallacy will not make the same calculation after they have invested effort, as they will hold on to already invested effort as a reason in and of itself to continue.