Unlike some other countries-here in Australia, state prosecutors can charge federal crimes and federal prosecutors can charge state ones. Australia doesn’t have the hard separation between state and federal legal systems that the US has
The question asked is: can the President pardon Trump for the federal part of the crime, thus reducing the charge to a misdemeanor. The answer is “No”, because he has not been convicted in federal court, there is nothing to pardon him of.
However it does raise the question: Is it proper to convict someone of a state crime based on “criminality” where the criminality is a federal crime that they have not been convicted of in federal court? It seems unlikely.
In any case, I believe all of this is just media speculation and presumably there will be more clear-cut charges in the real indictment.