I mean, if you have MFE prerequisites then sure. The prerequisites for modern financial engineering is having a good handle on probability theory and in particular stochastic calculus.
It would also depend on the program. Baruch is more for quant strats and wants to send people to option market makers/funds or to banks to sell derivatives. Something like Carnegie Mellon MSCF(Computational Finance) is more oriented to send people to Bridgewater or AQR, which run systematic strats(risk parity, factor, alternative risk premia, portable alpha, etc.).