It all depends on your writeConcern setting. This option is super critical to understand when deploying an MongoDb. Older versions had defaults that were more optimized for availability than consistency.
Even so, not flushing each write is not as bad as it sounds, if you have a 3-node replicaset and your w-parameter is set to majority (default), it means at least 2 servers have the write in memory. It would take both of them crashing at the same time for the unflushed write to be lost.
The idea is that MongoDB allows you to choose which corner of the CAP triangle you want, if you chose AP, that’s your decision. The defaults can of course be argued and I believe it’s been gradually moving over to more and more C for each version. Nowadays the journal does get flushed as next comment described.