If the government decides to get more serious about this stuff, there will be firsts! There will be people who "got away with it"! It's never applied perfectly evenly. You gotta start somewhere.
Of course the way he was thrown around, when they could have impounded a bunch of his assets and just restricted his movements... the police have their ways of doing things and restriction of speech in particular to avoid coverups is probably a huge chunk of their motivations.
Ghosn isn't the first executive in Japan to ever be arrested. But maybe the police felt the stakes were too high. During the Livedoor scandal, Horie had to post a 300 million yen bond for his temporary freedom, and that was for an "internet company". How much would Ghosn's bond need to be in comparison? Not saying that this is the right way to go about things, but it feels at least consistent.