(The ostensibly autotools-built files in the tarball did not correspond to the source repository, admittedly, but that’s another question, and I’m of two minds about that one. I know that’s not a popular take, but I believe Autotools has a point with its approach to source distributions.)
Furthermore, that’s not quite true[1]. The differences only concerned the exploit’s (very small) bootstrapper and were isolated to the generated configure script and one of the (non-XZ-specific) M4 scripts that participated in its generation, none of which are in the XZ Git repo to begin with—both are put there, and are supposed to be put there, by (one of the tools invoked by) autoreconf when building the release tarball. By contrast, the actual exploit binary that bootstrapper injected was inside the Git repo all along, disguised as a binary test input (as I’ve said above) and identical to the one in the tarball.
To detect the difference, the distro maintainers would have needed to detect the difference between the M4 file in the XZ release tarball and its supposed originals in one of the Autotools repos. Even then, the attacker could instead have shipped an unmodified M4 script but a configure script built with the malicious one. Then the maintainers would have needed to run autoreconf and note that the resulting configure script differed from the one shipped in the tarball. Which would have caused a ton of false positives, because that means using the exact versions of Autotools parts as the upstream maintainer. Unconditionally autoreconfing things would be better, but risk breakage because the backwards compatibility story in Autotools has historically not been good, because they’re not supposed to be used that way.
(Couldn’t you just check in the generated files and run autoreconf in a commit hook? You could. Glibc does that. I once tried to backport some patches—that included changes to configure.ac—to an old version of it. It sucked, because the actual generated configure file was the result of several merges and such and thus didn’t correspond to the output of autoreconf from any Autotools install in existence.)
It’s easy to dismiss this as autotools being horrible. I don’t believe it is; I believe Autotools have a point. By putting things in the release tarball that aren’t in the maintainer’s source code (meaning, nowadays, the project’s repo, but that wasn’t necessarily the case for a lot of their existence), they ensure that the source tarball can be built with the absolute bare minimum of tools: a POSIX shell with a minimal complement of utilities, the C compiler, and a POSIX make. The maintainer can introduce further dependencies, but that’s on them.
Compare this with for example CMake, which technically will generate a Makefile for you, but you can’t ship it to anybody unless they have the exact same CMake version as you, because that Makefile will turn around and invoke CMake some more. Similarly, you can’t build a Meson project without having the correct Python environment to run Meson and the build system’s Python code, just having make or ninja is not enough. And so on.
This is why I’m saying I’m of two minds about this (bootstrapper) part of the backdoor. We see the downsides of the Autotools approach in the XZ backdoor, but in the normal case I would much rather build a release of an Autotools-based project than a CMake- or Meson-based one. I can’t even say that the problem is the generated configure script being essentially an uninspectable binary, because the M4 file that generated it in XZ wasn’t, and the change was very subtle. The best I can imagine here is maintaining two branches of the source tree, a clean one and a release one, where each release commit is notionally a merge of the previous release commit and the current clean commit, and the release tarball is identical to the release commit’s tree (I think the uacme project does something like that?); but that still feels insufficient.
[1] https://gist.github.com/thesamesam/223949d5a074ebc3dce9ee78b...
Yes and no. "make -f Makefile.cvs" has been a supported workflow for decades. It's not what the "build from source" instructions will tell you to do, but those instructions are aimed primarily at end users building from source who may not have M4 etc. installed; developers are expected to use the Makefile.cvs workflow and I don't think it would be too unreasonable to expect dedicated distro packagers/build systems (as distinct from individual end users building for their own systems) to do the same.