Unfortunately I can't easily dig the cable out and bury it again in this case. I'll have to figure out how to pull a new cable using the existing cable through the PVC conduits as the cable shares a larger conduit with multiple other fibre and Ethernet cables. The whole project was orchestrated remotely in a different timezone with me giving the electricians instructions over WhatsApp photos and audio recordings, so that limited what I could realistically control onsite back then. Often the contractors would proceed with a do first ask questions later approach while I was still asleep. The networking project was holding up the entire home renovation so everything was learnt and planned in a short amount of time.
AFAIK fibre splicing and terminating tools are very expensive. Do point me in the right direction for the $50 tools and I could go get some and DIY.